Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AC232323.1-201ENST00000540724 2099 ntBASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 REXO1L5P-201ENST00000622260 2098 ntBASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AD001527.2-201ENST00000622994 785 ntBASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00308Q8TCZ7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.9□□□□□ -0.67
LINC00308Q8TCZ7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC00308Q8TCZ7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms