Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AL138709.1-201ENST00000614840 1693 ntBASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AC245884.6-201ENST00000515672 1067 ntBASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 CROCCP2-202ENST00000412962 2773 ntBASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AC093433.1-201ENST00000458048 571 ntBASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AC244452.3-201ENST00000636814 210 ntBASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 GGT3P-204ENST00000453783 1664 ntBASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AC006480.2-201ENST00000609770 1337 ntBASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 MIR6756-201ENST00000616240 63 ntBASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 AL603756.1-201ENST00000606511 2163 ntBASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
ALMS1Q8TCU4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
ALMS1Q8TCU4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms