Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 RNA5SP421-201ENST00000516864 134 ntBASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 AC015911.4-201ENST00000588022 1070 ntBASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 TUBB3P1-201ENST00000405796 1332 ntBASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 GGT3P-204ENST00000453783 1664 ntBASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 MIR943-201ENST00000401286 94 ntBASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 GPS2P2-201ENST00000430745 888 ntBASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 HLA-J-202ENST00000469281 1241 ntBASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 INGX-202ENST00000489074 768 ntBASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 AP001059.3-201ENST00000619053 235 ntBASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 AL391005.1-201ENST00000623953 2435 ntBASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC33Q8N5R6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 HCG4-201ENST00000418983 998 ntBASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 AC055876.3-201ENST00000431496 288 ntBASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC33Q8N5R6 AC138649.4-201ENST00000612222 287 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms