Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 GK-202ENST00000378941 458 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 MIR4321-201ENST00000592276 80 ntBASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCDC62Q6P9F0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 HLA-A-202ENST00000376806 1854 ntBASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 SPDYE19P-201ENST00000338590 713 ntBASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 DOC2GP-202ENST00000514950 1163 ntBASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 SDHAP3-202ENST00000515467 728 ntBASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 AC140912.1-201ENST00000577171 1054 ntBASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC62Q6P9F0 CU639417.3-201ENST00000624240 1404 ntBASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 AC124067.4-201ENST00000519691 2379 ntBASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms