Protein–RNA interactions for Protein: Q6EEV6

SUMO4, Small ubiquitin-related modifier 4, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO4Q6EEV6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 AC138894.3-201ENST00000603787 634 ntBASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 AL161772.1-201ENST00000610494 4412 ntBASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.82□□□□□ -0.52
SUMO4Q6EEV6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 PTCHD3P3-201ENST00000403073 906 ntBASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 KRT16P4-201ENST00000453883 522 ntBASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 SLC25A6P2-201ENST00000497974 877 ntBASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 AC106795.1-205ENST00000512851 1056 ntBASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 AC087641.1-201ENST00000557561 1021 ntBASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 AL356309.3-201ENST00000624132 1934 ntBASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 PPT1-215ENST00000641471 2368 ntBASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SUMO4Q6EEV6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.8□□□□□ -0.52
SUMO4Q6EEV6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SUMO4Q6EEV6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SUMO4Q6EEV6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SUMO4Q6EEV6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.8□□□□□ -0.52
SUMO4Q6EEV6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms