Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CBX1P83916 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CBX1P83916 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX1P83916 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.07■□□□□ 0.32
CBX1P83916 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CBX1P83916 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 INTS4P1-203ENST00000641008 3683 ntBASIC17.07■□□□□ 0.32
CBX1P83916 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CBX1P83916 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.07■□□□□ 0.32
CBX1P83916 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.07■□□□□ 0.32
CBX1P83916 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CBX1P83916 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CBX1P83916 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.07■□□□□ 0.32
CBX1P83916 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.07■□□□□ 0.32
CBX1P83916 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.07■□□□□ 0.32
CBX1P83916 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.07■□□□□ 0.32
CBX1P83916 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.07■□□□□ 0.32
CBX1P83916 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.07■□□□□ 0.32
CBX1P83916 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CBX1P83916 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.07■□□□□ 0.32
CBX1P83916 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 AC019294.4-201ENST00000561777 2905 ntBASIC17.07■□□□□ 0.32
CBX1P83916 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 HSPA7-201ENST00000445535 1927 ntBASIC17.07■□□□□ 0.32
CBX1P83916 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC17.07■□□□□ 0.32
CBX1P83916 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CBX1P83916 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CBX1P83916 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CBX1P83916 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX1P83916 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.06■□□□□ 0.32
CBX1P83916 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CBX1P83916 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CBX1P83916 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CBX1P83916 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.06■□□□□ 0.32
CBX1P83916 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CBX1P83916 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CBX1P83916 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 FAM207BP-201ENST00000447172 505 ntBASIC17.06■□□□□ 0.32
CBX1P83916 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.06■□□□□ 0.32
CBX1P83916 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.06■□□□□ 0.32
CBX1P83916 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 AC083880.1-201ENST00000608266 535 ntBASIC17.06■□□□□ 0.32
CBX1P83916 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CBX1P83916 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.06■□□□□ 0.32
CBX1P83916 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.06■□□□□ 0.32
CBX1P83916 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.06■□□□□ 0.32
CBX1P83916 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX1P83916 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.06■□□□□ 0.32
CBX1P83916 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.06■□□□□ 0.32
CBX1P83916 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX1P83916 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.05■□□□□ 0.32
CBX1P83916 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
CBX1P83916 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.05■□□□□ 0.32
CBX1P83916 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms