Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA4P78363 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA4P78363 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA4P78363 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCA4P78363 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCA4P78363 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA4P78363 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCA4P78363 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA4P78363 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ABCA4P78363 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 TTTY23B-201ENST00000442790 549 ntBASIC13.99□□□□□ -0.17
ABCA4P78363 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA4P78363 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.99□□□□□ -0.17
ABCA4P78363 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.99□□□□□ -0.17
ABCA4P78363 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.99□□□□□ -0.17
ABCA4P78363 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.99□□□□□ -0.17
ABCA4P78363 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCA4P78363 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCA4P78363 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.99□□□□□ -0.17
ABCA4P78363 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCA4P78363 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.99□□□□□ -0.17
ABCA4P78363 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
ABCA4P78363 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ABCA4P78363 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA4P78363 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.99□□□□□ -0.17
ABCA4P78363 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA4P78363 AC013467.2-201ENST00000605472 835 ntBASIC13.99□□□□□ -0.17
ABCA4P78363 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ABCA4P78363 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ABCA4P78363 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA4P78363 AC007541.1-201ENST00000570282 1469 ntBASIC13.99□□□□□ -0.17
ABCA4P78363 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ABCA4P78363 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA4P78363 RNF216P1-203ENST00000404404 2427 ntBASIC13.98□□□□□ -0.17
ABCA4P78363 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA4P78363 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
ABCA4P78363 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
ABCA4P78363 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA4P78363 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.98□□□□□ -0.17
ABCA4P78363 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.98□□□□□ -0.17
ABCA4P78363 AC087499.6-201ENST00000411576 835 ntBASIC13.98□□□□□ -0.17
ABCA4P78363 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.98□□□□□ -0.17
ABCA4P78363 SERBP1P3-201ENST00000459980 809 ntBASIC13.98□□□□□ -0.17
ABCA4P78363 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 SDHAP3-202ENST00000515467 728 ntBASIC13.98□□□□□ -0.17
ABCA4P78363 MIR4259-201ENST00000584466 101 ntBASIC13.98□□□□□ -0.17
ABCA4P78363 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.98□□□□□ -0.17
ABCA4P78363 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ABCA4P78363 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA4P78363 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA4P78363 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ABCA4P78363 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA4P78363 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCA4P78363 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
ABCA4P78363 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCA4P78363 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
ABCA4P78363 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA4P78363 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ABCA4P78363 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms