Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.58□□□□□ -0.07
ACTA1P68133 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ACTA1P68133 AC013268.4-201ENST00000637413 2228 ntBASIC14.58□□□□□ -0.07
ACTA1P68133 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ACTA1P68133 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.58□□□□□ -0.08
ACTA1P68133 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.58□□□□□ -0.08
ACTA1P68133 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.58□□□□□ -0.08
ACTA1P68133 LAGE3P1-201ENST00000425356 484 ntBASIC14.58□□□□□ -0.08
ACTA1P68133 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.58□□□□□ -0.08
ACTA1P68133 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.58□□□□□ -0.08
ACTA1P68133 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.58□□□□□ -0.08
ACTA1P68133 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
ACTA1P68133 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.58□□□□□ -0.08
ACTA1P68133 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.58□□□□□ -0.08
ACTA1P68133 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
ACTA1P68133 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ACTA1P68133 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.57□□□□□ -0.08
ACTA1P68133 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ACTA1P68133 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.57□□□□□ -0.08
ACTA1P68133 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.57□□□□□ -0.08
ACTA1P68133 AC006504.4-201ENST00000592118 1568 ntBASIC14.57□□□□□ -0.08
ACTA1P68133 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.57□□□□□ -0.08
ACTA1P68133 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
ACTA1P68133 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.57□□□□□ -0.08
ACTA1P68133 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.57□□□□□ -0.08
ACTA1P68133 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.57□□□□□ -0.08
ACTA1P68133 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
ACTA1P68133 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.57□□□□□ -0.08
ACTA1P68133 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.57□□□□□ -0.08
ACTA1P68133 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
ACTA1P68133 AC023157.3-201ENST00000619086 2088 ntBASIC14.57□□□□□ -0.08
ACTA1P68133 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.57□□□□□ -0.08
ACTA1P68133 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 AC023824.1-201ENST00000562945 2975 ntBASIC14.57□□□□□ -0.08
ACTA1P68133 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ACTA1P68133 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ACTA1P68133 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ACTA1P68133 PPT1-215ENST00000641471 2368 ntBASIC14.56□□□□□ -0.08
ACTA1P68133 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ACTA1P68133 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.56□□□□□ -0.08
ACTA1P68133 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 AC008677.1-201ENST00000519230 1561 ntBASIC14.56□□□□□ -0.08
ACTA1P68133 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
ACTA1P68133 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.56□□□□□ -0.08
ACTA1P68133 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.56□□□□□ -0.08
ACTA1P68133 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
ACTA1P68133 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ACTA1P68133 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ACTA1P68133 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ACTA1P68133 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.56□□□□□ -0.08
ACTA1P68133 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ACTA1P68133 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ACTA1P68133 HCG4P8-203ENST00000443049 980 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms