Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.18■□□□□ 0.18
NELFEP18615 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NELFEP18615 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 TOP3BP1-201ENST00000420768 1380 ntBASIC16.18■□□□□ 0.18
NELFEP18615 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NELFEP18615 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 HMGA1P7-201ENST00000406908 502 ntBASIC16.18■□□□□ 0.18
NELFEP18615 ADH5P3-201ENST00000433842 1137 ntBASIC16.18■□□□□ 0.18
NELFEP18615 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.18■□□□□ 0.18
NELFEP18615 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.18■□□□□ 0.18
NELFEP18615 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NELFEP18615 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NELFEP18615 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.18■□□□□ 0.18
NELFEP18615 AC027612.4-201ENST00000605371 583 ntBASIC16.18■□□□□ 0.18
NELFEP18615 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.18■□□□□ 0.18
NELFEP18615 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 AC099522.2-201ENST00000607001 744 ntBASIC16.18■□□□□ 0.18
NELFEP18615 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.18■□□□□ 0.18
NELFEP18615 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NELFEP18615 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NELFEP18615 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NELFEP18615 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.18■□□□□ 0.18
NELFEP18615 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NELFEP18615 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NELFEP18615 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
NELFEP18615 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
NELFEP18615 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
NELFEP18615 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFEP18615 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NELFEP18615 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFEP18615 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.17■□□□□ 0.18
NELFEP18615 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NELFEP18615 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.17■□□□□ 0.18
NELFEP18615 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NELFEP18615 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFEP18615 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.17■□□□□ 0.18
NELFEP18615 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.17■□□□□ 0.18
NELFEP18615 AC004461.1-201ENST00000412461 403 ntBASIC16.17■□□□□ 0.18
NELFEP18615 AL355306.1-201ENST00000415580 579 ntBASIC16.17■□□□□ 0.18
NELFEP18615 HCG4-201ENST00000418983 998 ntBASIC16.17■□□□□ 0.18
NELFEP18615 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.17■□□□□ 0.18
NELFEP18615 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.17■□□□□ 0.18
NELFEP18615 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NELFEP18615 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFEP18615 FAM86C2P-203ENST00000528684 1004 ntBASIC16.17■□□□□ 0.18
NELFEP18615 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
NELFEP18615 AC022145.2-201ENST00000598203 171 ntBASIC16.17■□□□□ 0.18
NELFEP18615 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.17■□□□□ 0.18
NELFEP18615 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.17■□□□□ 0.18
NELFEP18615 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
NELFEP18615 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFEP18615 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NELFEP18615 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFEP18615 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.17■□□□□ 0.18
NELFEP18615 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NELFEP18615 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFEP18615 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFEP18615 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFEP18615 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.17■□□□□ 0.18
NELFEP18615 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NELFEP18615 LINC02012-201ENST00000608206 1725 ntBASIC16.16■□□□□ 0.18
NELFEP18615 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NELFEP18615 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFEP18615 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.16■□□□□ 0.18
NELFEP18615 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms