Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN1P18031 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PTPN1P18031 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTPN1P18031 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PTPN1P18031 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PTPN1P18031 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN1P18031 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN1P18031 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPN1P18031 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.21■□□□□ 0.35
PTPN1P18031 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN1P18031 IGHV3-42-201ENST00000520410 361 ntBASIC17.21■□□□□ 0.35
PTPN1P18031 AC027369.6-201ENST00000525520 931 ntBASIC17.21■□□□□ 0.35
PTPN1P18031 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPN1P18031 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN1P18031 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPN1P18031 AC026979.3-201ENST00000607315 403 ntBASIC17.21■□□□□ 0.35
PTPN1P18031 AC073592.8-201ENST00000624126 511 ntBASIC17.21■□□□□ 0.35
PTPN1P18031 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN1P18031 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
PTPN1P18031 AC092364.2-201ENST00000596710 2692 ntBASIC17.21■□□□□ 0.35
PTPN1P18031 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN1P18031 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN1P18031 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN1P18031 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.21■□□□□ 0.34
PTPN1P18031 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN1P18031 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PTPN1P18031 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN1P18031 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN1P18031 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN1P18031 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 AL662844.4-201ENST00000606367 2838 ntBASIC17.2■□□□□ 0.34
PTPN1P18031 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN1P18031 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN1P18031 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN1P18031 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.2■□□□□ 0.34
PTPN1P18031 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.2■□□□□ 0.34
PTPN1P18031 AC093214.1-201ENST00000511688 1107 ntBASIC17.2■□□□□ 0.34
PTPN1P18031 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN1P18031 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.2■□□□□ 0.34
PTPN1P18031 AL589739.1-201ENST00000607720 493 ntBASIC17.2■□□□□ 0.34
PTPN1P18031 AL138828.2-201ENST00000615812 383 ntBASIC17.2■□□□□ 0.34
PTPN1P18031 SPDYE12P-201ENST00000618416 771 ntBASIC17.2■□□□□ 0.34
PTPN1P18031 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN1P18031 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN1P18031 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN1P18031 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN1P18031 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN1P18031 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN1P18031 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN1P18031 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN1P18031 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PTPN1P18031 CETN4P-206ENST00000642099 2168 ntBASIC17.19■□□□□ 0.34
PTPN1P18031 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN1P18031 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN1P18031 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN1P18031 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PTPN1P18031 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PTPN1P18031 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN1P18031 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN1P18031 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN1P18031 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN1P18031 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTPN1P18031 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN1P18031 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN1P18031 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN1P18031 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN1P18031 AL139010.1-201ENST00000454878 894 ntBASIC17.19■□□□□ 0.34
PTPN1P18031 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN1P18031 HLA-V-204ENST00000476601 1289 ntBASIC17.19■□□□□ 0.34
PTPN1P18031 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN1P18031 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN1P18031 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN1P18031 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.19■□□□□ 0.34
PTPN1P18031 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN1P18031 AC006449.6-201ENST00000612330 2296 ntBASIC17.19■□□□□ 0.34
PTPN1P18031 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms