Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN11O75508 MTHFR-217ENST00000641820 1569 ntBASIC16.6■□□□□ 0.25
CLDN11O75508 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLDN11O75508 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN11O75508 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN11O75508 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLDN11O75508 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN11O75508 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLDN11O75508 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN11O75508 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDN11O75508 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDN11O75508 BASP1P1-201ENST00000430708 665 ntBASIC16.59■□□□□ 0.25
CLDN11O75508 AC092580.3-201ENST00000430932 139 ntBASIC16.59■□□□□ 0.25
CLDN11O75508 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN11O75508 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN11O75508 AL079307.3-201ENST00000556114 283 ntBASIC16.59■□□□□ 0.25
CLDN11O75508 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN11O75508 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 AL138828.2-201ENST00000615812 383 ntBASIC16.59■□□□□ 0.25
CLDN11O75508 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLDN11O75508 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN11O75508 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN11O75508 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDN11O75508 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLDN11O75508 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN11O75508 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN11O75508 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN11O75508 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN11O75508 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN11O75508 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.58■□□□□ 0.25
CLDN11O75508 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN11O75508 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CLDN11O75508 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN11O75508 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.58■□□□□ 0.25
CLDN11O75508 AC092364.2-201ENST00000596710 2692 ntBASIC16.58■□□□□ 0.25
CLDN11O75508 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN11O75508 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLDN11O75508 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.58■□□□□ 0.24
CLDN11O75508 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 RNA5SP421-201ENST00000516864 134 ntBASIC16.58■□□□□ 0.24
CLDN11O75508 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.58■□□□□ 0.24
CLDN11O75508 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLDN11O75508 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN11O75508 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLDN11O75508 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLDN11O75508 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN11O75508 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN11O75508 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLDN11O75508 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN11O75508 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN11O75508 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN11O75508 AC079328.2-201ENST00000561241 3354 ntBASIC16.57■□□□□ 0.24
CLDN11O75508 AC084018.2-201ENST00000613093 2607 ntBASIC16.57■□□□□ 0.24
CLDN11O75508 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN11O75508 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CLDN11O75508 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN11O75508 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN11O75508 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN11O75508 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CLDN11O75508 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN11O75508 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN11O75508 SPDYE17-201ENST00000412399 783 ntBASIC16.57■□□□□ 0.24
CLDN11O75508 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN11O75508 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN11O75508 HMGN1P19-201ENST00000436976 333 ntBASIC16.57■□□□□ 0.24
CLDN11O75508 AC093214.1-201ENST00000511688 1107 ntBASIC16.57■□□□□ 0.24
CLDN11O75508 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN11O75508 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN11O75508 AC243562.2-201ENST00000561247 970 ntBASIC16.57■□□□□ 0.24
CLDN11O75508 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN11O75508 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms