Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.6■□□□□ 0.25
RIPK2O43353 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RIPK2O43353 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 CICP24-201ENST00000605464 2705 ntBASIC16.6■□□□□ 0.25
RIPK2O43353 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.6■□□□□ 0.25
RIPK2O43353 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.6■□□□□ 0.25
RIPK2O43353 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RIPK2O43353 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RIPK2O43353 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RIPK2O43353 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.59■□□□□ 0.25
RIPK2O43353 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.59■□□□□ 0.25
RIPK2O43353 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RIPK2O43353 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.59■□□□□ 0.25
RIPK2O43353 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RIPK2O43353 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.59■□□□□ 0.25
RIPK2O43353 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RIPK2O43353 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.59■□□□□ 0.25
RIPK2O43353 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
RIPK2O43353 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.59■□□□□ 0.25
RIPK2O43353 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.59■□□□□ 0.25
RIPK2O43353 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.59■□□□□ 0.25
RIPK2O43353 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.59■□□□□ 0.25
RIPK2O43353 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.59■□□□□ 0.25
RIPK2O43353 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.59■□□□□ 0.25
RIPK2O43353 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.59■□□□□ 0.25
RIPK2O43353 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RIPK2O43353 MTDHP4-201ENST00000600287 670 ntBASIC16.59■□□□□ 0.25
RIPK2O43353 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.59■□□□□ 0.25
RIPK2O43353 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 AC129492.6-201ENST00000611383 1305 ntBASIC16.59■□□□□ 0.25
RIPK2O43353 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.59■□□□□ 0.25
RIPK2O43353 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.59■□□□□ 0.25
RIPK2O43353 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RIPK2O43353 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RIPK2O43353 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RIPK2O43353 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.59■□□□□ 0.25
RIPK2O43353 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RIPK2O43353 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RIPK2O43353 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RIPK2O43353 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RIPK2O43353 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RIPK2O43353 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RIPK2O43353 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.58■□□□□ 0.25
RIPK2O43353 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RIPK2O43353 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
RIPK2O43353 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RIPK2O43353 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RIPK2O43353 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RIPK2O43353 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.58■□□□□ 0.25
RIPK2O43353 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RIPK2O43353 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.58■□□□□ 0.24
RIPK2O43353 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.58■□□□□ 0.24
RIPK2O43353 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 SART3-203ENST00000546611 1184 ntBASIC16.58■□□□□ 0.24
RIPK2O43353 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.58■□□□□ 0.24
RIPK2O43353 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.58■□□□□ 0.24
RIPK2O43353 MTDHP3-201ENST00000594186 672 ntBASIC16.58■□□□□ 0.24
RIPK2O43353 AC069148.1-201ENST00000608741 768 ntBASIC16.58■□□□□ 0.24
RIPK2O43353 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.58■□□□□ 0.24
RIPK2O43353 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.58■□□□□ 0.24
RIPK2O43353 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.58■□□□□ 0.24
RIPK2O43353 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.58■□□□□ 0.24
RIPK2O43353 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RIPK2O43353 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RIPK2O43353 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RIPK2O43353 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RIPK2O43353 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.57■□□□□ 0.24
RIPK2O43353 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RIPK2O43353 AL009178.2-201ENST00000597278 2719 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms