Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PNMA3Q9UL41 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.69■□□□□ 0.58
PNMA3Q9UL41 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA3Q9UL41 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
PNMA3Q9UL41 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.68■□□□□ 0.58
PNMA3Q9UL41 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 KRT43P-201ENST00000434019 910 ntBASIC18.68■□□□□ 0.58
PNMA3Q9UL41 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 AC008735.3-201ENST00000596646 500 ntBASIC18.68■□□□□ 0.58
PNMA3Q9UL41 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 AL645728.1-201ENST00000366221 2101 ntBASIC18.68■□□□□ 0.58
PNMA3Q9UL41 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 GGT4P-201ENST00000623672 1708 ntBASIC18.68■□□□□ 0.58
PNMA3Q9UL41 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA3Q9UL41 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA3Q9UL41 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 MIR4321-201ENST00000592276 80 ntBASIC18.66■□□□□ 0.58
PNMA3Q9UL41 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 AL033527.4-201ENST00000641026 673 ntBASIC18.66■□□□□ 0.58
PNMA3Q9UL41 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA3Q9UL41 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms