Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.42□□□□□ -0.42
AP1S3Q96PC3 AC092597.1-201ENST00000487352 616 ntBASIC12.42□□□□□ -0.42
AP1S3Q96PC3 STK19B-204ENST00000512515 211 ntBASIC12.42□□□□□ -0.42
AP1S3Q96PC3 GUSBP12-201ENST00000513727 720 ntBASIC12.42□□□□□ -0.42
AP1S3Q96PC3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP1S3Q96PC3 AL135999.2-201ENST00000622438 1686 ntBASIC12.42□□□□□ -0.42
AP1S3Q96PC3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 AC003669.1-201ENST00000334569 611 ntBASIC12.41□□□□□ -0.42
AP1S3Q96PC3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 AC009336.1-201ENST00000608941 1553 ntBASIC12.41□□□□□ -0.42
AP1S3Q96PC3 AL049757.1-201ENST00000616842 1596 ntBASIC12.41□□□□□ -0.42
AP1S3Q96PC3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.41□□□□□ -0.42
AP1S3Q96PC3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 AL391256.1-201ENST00000443260 1855 ntBASIC12.4□□□□□ -0.42
AP1S3Q96PC3 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms