Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP13Q92995 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.1■□□□□ 0.33
USP13Q92995 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
USP13Q92995 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP13Q92995 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
USP13Q92995 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP13Q92995 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.1■□□□□ 0.33
USP13Q92995 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP13Q92995 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.1■□□□□ 0.33
USP13Q92995 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
USP13Q92995 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP13Q92995 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP13Q92995 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.09■□□□□ 0.33
USP13Q92995 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
USP13Q92995 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
USP13Q92995 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
USP13Q92995 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.09■□□□□ 0.33
USP13Q92995 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.09■□□□□ 0.33
USP13Q92995 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.09■□□□□ 0.33
USP13Q92995 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.09■□□□□ 0.33
USP13Q92995 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.09■□□□□ 0.33
USP13Q92995 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.09■□□□□ 0.33
USP13Q92995 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.09■□□□□ 0.33
USP13Q92995 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.09■□□□□ 0.33
USP13Q92995 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP13Q92995 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.09■□□□□ 0.33
USP13Q92995 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.09■□□□□ 0.33
USP13Q92995 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.09■□□□□ 0.33
USP13Q92995 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.09■□□□□ 0.33
USP13Q92995 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.09■□□□□ 0.33
USP13Q92995 AC060834.1-201ENST00000443027 2032 ntBASIC17.09■□□□□ 0.33
USP13Q92995 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP13Q92995 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.09■□□□□ 0.33
USP13Q92995 AC079328.2-201ENST00000561241 3354 ntBASIC17.09■□□□□ 0.33
USP13Q92995 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.08■□□□□ 0.33
USP13Q92995 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP13Q92995 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP13Q92995 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP13Q92995 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP13Q92995 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP13Q92995 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
USP13Q92995 AL645728.1-201ENST00000366221 2101 ntBASIC17.08■□□□□ 0.33
USP13Q92995 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.08■□□□□ 0.33
USP13Q92995 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
USP13Q92995 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP13Q92995 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.08■□□□□ 0.33
USP13Q92995 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.08■□□□□ 0.33
USP13Q92995 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
USP13Q92995 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
USP13Q92995 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 AL353705.2-201ENST00000428243 662 ntBASIC17.08■□□□□ 0.32
USP13Q92995 HLA-V-204ENST00000476601 1289 ntBASIC17.08■□□□□ 0.32
USP13Q92995 SERBP1P5-201ENST00000510079 1181 ntBASIC17.08■□□□□ 0.32
USP13Q92995 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.08■□□□□ 0.32
USP13Q92995 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.08■□□□□ 0.32
USP13Q92995 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 AL139011.1-202ENST00000642063 584 ntBASIC17.08■□□□□ 0.32
USP13Q92995 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
USP13Q92995 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
USP13Q92995 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.08■□□□□ 0.32
USP13Q92995 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
USP13Q92995 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP13Q92995 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
USP13Q92995 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP13Q92995 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP13Q92995 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.07■□□□□ 0.32
USP13Q92995 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP13Q92995 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.07■□□□□ 0.32
USP13Q92995 AL512652.2-201ENST00000625156 1716 ntBASIC17.07■□□□□ 0.32
USP13Q92995 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP13Q92995 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP13Q92995 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP13Q92995 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.07■□□□□ 0.32
USP13Q92995 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms