Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.46■■□□□ 1.03
COL16A1Q07092 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL16A1Q07092 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.46■■□□□ 1.03
COL16A1Q07092 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL16A1Q07092 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.46■■□□□ 1.03
COL16A1Q07092 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
COL16A1Q07092 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL16A1Q07092 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
COL16A1Q07092 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL16A1Q07092 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL16A1Q07092 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC21.46■■□□□ 1.03
COL16A1Q07092 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL16A1Q07092 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.46■■□□□ 1.03
COL16A1Q07092 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC21.46■■□□□ 1.03
COL16A1Q07092 RNF41-210ENST00000552244 716 ntTSL 3 BASIC21.46■■□□□ 1.03
COL16A1Q07092 AC132938.4-201ENST00000623835 848 ntBASIC21.46■■□□□ 1.03
COL16A1Q07092 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC21.46■■□□□ 1.03
COL16A1Q07092 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.46■■□□□ 1.03
COL16A1Q07092 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
COL16A1Q07092 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COL16A1Q07092 KRT8P35-201ENST00000483942 1338 ntBASIC21.46■■□□□ 1.03
COL16A1Q07092 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL16A1Q07092 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL16A1Q07092 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL16A1Q07092 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.46■■□□□ 1.03
COL16A1Q07092 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL16A1Q07092 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.45■■□□□ 1.02
COL16A1Q07092 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
COL16A1Q07092 PCGF3-213ENST00000620529 1899 ntBASIC21.45■■□□□ 1.02
COL16A1Q07092 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL16A1Q07092 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL16A1Q07092 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
COL16A1Q07092 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL16A1Q07092 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL16A1Q07092 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL16A1Q07092 RNU1-114P-201ENST00000365297 166 ntBASIC21.45■■□□□ 1.02
COL16A1Q07092 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC21.45■■□□□ 1.02
COL16A1Q07092 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC21.45■■□□□ 1.02
COL16A1Q07092 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC21.45■■□□□ 1.02
COL16A1Q07092 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC21.45■■□□□ 1.02
COL16A1Q07092 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC21.45■■□□□ 1.02
COL16A1Q07092 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
COL16A1Q07092 AC243562.2-201ENST00000561247 970 ntBASIC21.45■■□□□ 1.02
COL16A1Q07092 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC21.45■■□□□ 1.02
COL16A1Q07092 DIO1-215ENST00000610607 796 ntTSL 5 BASIC21.45■■□□□ 1.02
COL16A1Q07092 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL16A1Q07092 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC21.45■■□□□ 1.02
COL16A1Q07092 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL16A1Q07092 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.45■■□□□ 1.02
COL16A1Q07092 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL16A1Q07092 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL16A1Q07092 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
COL16A1Q07092 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.45■■□□□ 1.02
COL16A1Q07092 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.45■■□□□ 1.02
COL16A1Q07092 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL16A1Q07092 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
COL16A1Q07092 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 AC136604.1-201ENST00000418535 575 ntBASIC21.44■■□□□ 1.02
COL16A1Q07092 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COL16A1Q07092 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC21.44■■□□□ 1.02
COL16A1Q07092 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC21.44■■□□□ 1.02
COL16A1Q07092 AC013355.1-201ENST00000562625 723 ntBASIC21.44■■□□□ 1.02
COL16A1Q07092 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC21.44■■□□□ 1.02
COL16A1Q07092 YRDCP1-201ENST00000621419 643 ntBASIC21.44■■□□□ 1.02
COL16A1Q07092 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COL16A1Q07092 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.44■■□□□ 1.02
COL16A1Q07092 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
COL16A1Q07092 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.44■■□□□ 1.02
COL16A1Q07092 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC21.44■■□□□ 1.02
COL16A1Q07092 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 CRCP-204ENST00000398684 492 ntTSL 2 BASIC21.44■■□□□ 1.02
COL16A1Q07092 MPV17-205ENST00000402310 906 ntTSL 5 BASIC21.44■■□□□ 1.02
COL16A1Q07092 HNRNPA1P63-201ENST00000427917 963 ntBASIC21.44■■□□□ 1.02
COL16A1Q07092 CTBP2P4-201ENST00000513884 920 ntBASIC21.44■■□□□ 1.02
COL16A1Q07092 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC21.44■■□□□ 1.02
COL16A1Q07092 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 AC073352.2-201ENST00000609385 439 ntBASIC21.44■■□□□ 1.02
COL16A1Q07092 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL16A1Q07092 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
COL16A1Q07092 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL16A1Q07092 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL16A1Q07092 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
COL16A1Q07092 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL16A1Q07092 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL16A1Q07092 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL16A1Q07092 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
COL16A1Q07092 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL16A1Q07092 AC092068.3-201ENST00000587894 2016 ntBASIC21.43■■□□□ 1.02
COL16A1Q07092 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL16A1Q07092 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms