Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL590560.3-201ENST00000623350 461 ntBASIC16.11■□□□□ 0.17
SRP54P61011 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP54P61011 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP54P61011 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SRP54P61011 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP54P61011 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP54P61011 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.11■□□□□ 0.17
SRP54P61011 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SRP54P61011 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP54P61011 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SRP54P61011 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.11■□□□□ 0.17
SRP54P61011 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP54P61011 AL596257.1-201ENST00000641463 2694 ntBASIC16.11■□□□□ 0.17
SRP54P61011 AC100757.3-201ENST00000622361 1406 ntBASIC16.11■□□□□ 0.17
SRP54P61011 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SRP54P61011 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SRP54P61011 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 AL589702.1-201ENST00000641229 1509 ntBASIC16.1■□□□□ 0.17
SRP54P61011 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.1■□□□□ 0.17
SRP54P61011 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.1■□□□□ 0.17
SRP54P61011 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
SRP54P61011 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SRP54P61011 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 AL035633.1-201ENST00000406139 838 ntBASIC16.1■□□□□ 0.17
SRP54P61011 MTND6P24-201ENST00000440466 518 ntBASIC16.1■□□□□ 0.17
SRP54P61011 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 HLA-V-204ENST00000476601 1289 ntBASIC16.1■□□□□ 0.17
SRP54P61011 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.1■□□□□ 0.17
SRP54P61011 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SRP54P61011 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SRP54P61011 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.1■□□□□ 0.17
SRP54P61011 AC105021.1-202ENST00000570572 669 ntBASIC16.1■□□□□ 0.17
SRP54P61011 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.1■□□□□ 0.17
SRP54P61011 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.1■□□□□ 0.17
SRP54P61011 AC024267.1-201ENST00000582320 895 ntBASIC16.1■□□□□ 0.17
SRP54P61011 RN7SL828P-201ENST00000607615 303 ntBASIC16.1■□□□□ 0.17
SRP54P61011 AL138828.2-201ENST00000615812 383 ntBASIC16.1■□□□□ 0.17
SRP54P61011 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SRP54P61011 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
SRP54P61011 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SRP54P61011 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.1■□□□□ 0.17
SRP54P61011 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.1■□□□□ 0.17
SRP54P61011 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRP54P61011 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.1■□□□□ 0.17
SRP54P61011 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SRP54P61011 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SRP54P61011 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.09■□□□□ 0.17
SRP54P61011 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.09■□□□□ 0.17
SRP54P61011 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.09■□□□□ 0.17
SRP54P61011 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.09■□□□□ 0.17
SRP54P61011 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.09■□□□□ 0.17
SRP54P61011 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.09■□□□□ 0.17
SRP54P61011 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.09■□□□□ 0.17
SRP54P61011 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.09■□□□□ 0.17
SRP54P61011 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.09■□□□□ 0.17
SRP54P61011 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 PCGF3-213ENST00000620529 1899 ntBASIC16.09■□□□□ 0.17
SRP54P61011 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.09■□□□□ 0.17
SRP54P61011 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.09■□□□□ 0.17
SRP54P61011 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.09■□□□□ 0.17
SRP54P61011 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP54P61011 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SRP54P61011 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRP54P61011 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.08■□□□□ 0.17
SRP54P61011 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.08■□□□□ 0.17
SRP54P61011 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SRP54P61011 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRP54P61011 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRP54P61011 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.08■□□□□ 0.16
SRP54P61011 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRP54P61011 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SRP54P61011 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms