Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17■□□□□ 0.31
CDH6P55285 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17■□□□□ 0.31
CDH6P55285 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH6P55285 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17■□□□□ 0.31
CDH6P55285 AC073439.1-201ENST00000624121 1774 ntBASIC17■□□□□ 0.31
CDH6P55285 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 NMU-202ENST00000505262 693 ntTSL 3 BASIC17■□□□□ 0.31
CDH6P55285 AC112191.1-201ENST00000523689 701 ntBASIC17■□□□□ 0.31
CDH6P55285 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17■□□□□ 0.31
CDH6P55285 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH6P55285 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17■□□□□ 0.31
CDH6P55285 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
CDH6P55285 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CDH6P55285 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDH6P55285 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDH6P55285 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH6P55285 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH6P55285 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH6P55285 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.99■□□□□ 0.31
CDH6P55285 PAUPAR-201ENST00000630360 2965 ntBASIC16.99■□□□□ 0.31
CDH6P55285 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH6P55285 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH6P55285 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CDH6P55285 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH6P55285 AC132872.4-202ENST00000622924 2756 ntBASIC16.99■□□□□ 0.31
CDH6P55285 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH6P55285 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH6P55285 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.99■□□□□ 0.31
CDH6P55285 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH6P55285 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 AC099522.2-201ENST00000607001 744 ntBASIC16.99■□□□□ 0.31
CDH6P55285 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CDH6P55285 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CDH6P55285 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH6P55285 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH6P55285 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
CDH6P55285 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH6P55285 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH6P55285 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH6P55285 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CDH6P55285 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CDH6P55285 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH6P55285 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CDH6P55285 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH6P55285 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CDH6P55285 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH6P55285 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDH6P55285 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH6P55285 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH6P55285 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH6P55285 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH6P55285 POLD2P1-201ENST00000511220 997 ntBASIC16.98■□□□□ 0.31
CDH6P55285 PGAM5P1-201ENST00000518923 814 ntBASIC16.98■□□□□ 0.31
CDH6P55285 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH6P55285 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.98■□□□□ 0.31
CDH6P55285 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH6P55285 AL671883.3-201ENST00000603274 991 ntBASIC16.98■□□□□ 0.31
CDH6P55285 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.98■□□□□ 0.31
CDH6P55285 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CDH6P55285 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH6P55285 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms