Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.87■□□□□ 0.29
NEK3P51956 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NEK3P51956 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.87■□□□□ 0.29
NEK3P51956 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.87■□□□□ 0.29
NEK3P51956 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.87■□□□□ 0.29
NEK3P51956 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NEK3P51956 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.87■□□□□ 0.29
NEK3P51956 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NEK3P51956 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.86■□□□□ 0.29
NEK3P51956 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.86■□□□□ 0.29
NEK3P51956 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.86■□□□□ 0.29
NEK3P51956 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.86■□□□□ 0.29
NEK3P51956 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.86■□□□□ 0.29
NEK3P51956 AC004461.1-201ENST00000412461 403 ntBASIC16.86■□□□□ 0.29
NEK3P51956 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.86■□□□□ 0.29
NEK3P51956 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 SPDYE11-202ENST00000450699 704 ntBASIC16.86■□□□□ 0.29
NEK3P51956 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.86■□□□□ 0.29
NEK3P51956 RN7SL589P-201ENST00000481268 310 ntBASIC16.86■□□□□ 0.29
NEK3P51956 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.86■□□□□ 0.29
NEK3P51956 SPDYE9P-201ENST00000570642 692 ntBASIC16.86■□□□□ 0.29
NEK3P51956 MIR3909-201ENST00000579518 119 ntBASIC16.86■□□□□ 0.29
NEK3P51956 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.86■□□□□ 0.29
NEK3P51956 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.86■□□□□ 0.29
NEK3P51956 SPDYE10P-202ENST00000612005 668 ntBASIC16.86■□□□□ 0.29
NEK3P51956 SPDYE8P-202ENST00000612377 668 ntBASIC16.86■□□□□ 0.29
NEK3P51956 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.86■□□□□ 0.29
NEK3P51956 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.86■□□□□ 0.29
NEK3P51956 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NEK3P51956 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.86■□□□□ 0.29
NEK3P51956 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NEK3P51956 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NEK3P51956 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NEK3P51956 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.86■□□□□ 0.29
NEK3P51956 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NEK3P51956 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.85■□□□□ 0.29
NEK3P51956 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.85■□□□□ 0.29
NEK3P51956 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.85■□□□□ 0.29
NEK3P51956 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.85■□□□□ 0.29
NEK3P51956 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.85■□□□□ 0.29
NEK3P51956 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.85■□□□□ 0.29
NEK3P51956 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.85■□□□□ 0.29
NEK3P51956 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.85■□□□□ 0.29
NEK3P51956 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.85■□□□□ 0.29
NEK3P51956 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 CYP2A7P1-201ENST00000595391 815 ntBASIC16.85■□□□□ 0.29
NEK3P51956 AC027612.4-201ENST00000605371 583 ntBASIC16.85■□□□□ 0.29
NEK3P51956 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.85■□□□□ 0.29
NEK3P51956 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NEK3P51956 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NEK3P51956 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.85■□□□□ 0.29
NEK3P51956 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEK3P51956 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.84■□□□□ 0.29
NEK3P51956 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEK3P51956 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEK3P51956 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEK3P51956 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms