Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF144AP50876 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF144AP50876 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF144AP50876 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF144AP50876 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RNF144AP50876 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF144AP50876 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF144AP50876 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.24■□□□□ 0.03
RNF144AP50876 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF144AP50876 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.24■□□□□ 0.03
RNF144AP50876 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
RNF144AP50876 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.24■□□□□ 0.03
RNF144AP50876 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF144AP50876 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF144AP50876 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF144AP50876 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF144AP50876 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RNF144AP50876 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
RNF144AP50876 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF144AP50876 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF144AP50876 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF144AP50876 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 AP002414.2-201ENST00000591780 3365 ntBASIC15.24■□□□□ 0.03
RNF144AP50876 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
RNF144AP50876 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
RNF144AP50876 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF144AP50876 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF144AP50876 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RNF144AP50876 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF144AP50876 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF144AP50876 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RNF144AP50876 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF144AP50876 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF144AP50876 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RNF144AP50876 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF144AP50876 RNA5SP416-201ENST00000516838 111 ntBASIC15.23■□□□□ 0.03
RNF144AP50876 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
RNF144AP50876 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.23■□□□□ 0.03
RNF144AP50876 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 AC027601.4-201ENST00000611259 610 ntBASIC15.23■□□□□ 0.03
RNF144AP50876 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RNF144AP50876 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF144AP50876 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RNF144AP50876 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF144AP50876 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF144AP50876 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF144AP50876 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF144AP50876 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RNF144AP50876 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF144AP50876 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF144AP50876 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF144AP50876 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.22■□□□□ 0.03
RNF144AP50876 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RNF144AP50876 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms