Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 TMEM14DP-201ENST00000422205 345 ntBASIC17.93■□□□□ 0.46
CPT1AP50416 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CPT1AP50416 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.93■□□□□ 0.46
CPT1AP50416 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.93■□□□□ 0.46
CPT1AP50416 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.93■□□□□ 0.46
CPT1AP50416 AC092552.1-201ENST00000547243 906 ntBASIC17.93■□□□□ 0.46
CPT1AP50416 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CPT1AP50416 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.93■□□□□ 0.46
CPT1AP50416 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.93■□□□□ 0.46
CPT1AP50416 AL512343.1-201ENST00000605837 169 ntBASIC17.93■□□□□ 0.46
CPT1AP50416 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CPT1AP50416 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CPT1AP50416 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.93■□□□□ 0.46
CPT1AP50416 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.93■□□□□ 0.46
CPT1AP50416 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.93■□□□□ 0.46
CPT1AP50416 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.93■□□□□ 0.46
CPT1AP50416 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 HLA-A-202ENST00000376806 1854 ntBASIC17.92■□□□□ 0.46
CPT1AP50416 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 CDC14C-201ENST00000428251 1719 ntBASIC17.92■□□□□ 0.46
CPT1AP50416 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPT1AP50416 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.92■□□□□ 0.46
CPT1AP50416 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CPT1AP50416 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CPT1AP50416 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 AC036164.1-201ENST00000570544 333 ntBASIC17.92■□□□□ 0.46
CPT1AP50416 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPT1AP50416 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 MIR6799-201ENST00000620297 69 ntBASIC17.92■□□□□ 0.46
CPT1AP50416 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CPT1AP50416 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPT1AP50416 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.92■□□□□ 0.46
CPT1AP50416 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.92■□□□□ 0.46
CPT1AP50416 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPT1AP50416 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.92■□□□□ 0.46
CPT1AP50416 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.91■□□□□ 0.46
CPT1AP50416 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.91■□□□□ 0.46
CPT1AP50416 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.91■□□□□ 0.46
CPT1AP50416 AL645608.8-201ENST00000606034 2086 ntBASIC17.91■□□□□ 0.46
CPT1AP50416 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.91■□□□□ 0.46
CPT1AP50416 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CPT1AP50416 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.91■□□□□ 0.46
CPT1AP50416 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.91■□□□□ 0.46
CPT1AP50416 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.91■□□□□ 0.46
CPT1AP50416 EEF1DP4-201ENST00000446006 880 ntBASIC17.91■□□□□ 0.46
CPT1AP50416 RN7SL399P-201ENST00000471648 279 ntBASIC17.91■□□□□ 0.46
CPT1AP50416 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.91■□□□□ 0.46
CPT1AP50416 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.91■□□□□ 0.46
CPT1AP50416 AC008735.3-201ENST00000596646 500 ntBASIC17.91■□□□□ 0.46
CPT1AP50416 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.91■□□□□ 0.46
CPT1AP50416 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.91■□□□□ 0.46
CPT1AP50416 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.91■□□□□ 0.46
CPT1AP50416 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CPT1AP50416 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 AL592424.1-201ENST00000563624 1536 ntBASIC17.91■□□□□ 0.46
CPT1AP50416 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.91■□□□□ 0.46
CPT1AP50416 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.91■□□□□ 0.46
CPT1AP50416 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.91■□□□□ 0.46
CPT1AP50416 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CPT1AP50416 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPT1AP50416 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CPT1AP50416 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 KRT8P37-201ENST00000451609 1420 ntBASIC17.9■□□□□ 0.46
CPT1AP50416 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.9■□□□□ 0.46
CPT1AP50416 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPT1AP50416 AP001094.4-201ENST00000579008 2176 ntBASIC17.9■□□□□ 0.46
CPT1AP50416 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms