Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.15□□□□□ -0.14
CBX5P45973 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.15□□□□□ -0.14
CBX5P45973 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CBX5P45973 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CBX5P45973 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CBX5P45973 AC073508.3-201ENST00000619697 1419 ntBASIC14.15□□□□□ -0.14
CBX5P45973 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.15□□□□□ -0.14
CBX5P45973 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.15□□□□□ -0.15
CBX5P45973 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
CBX5P45973 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CBX5P45973 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CBX5P45973 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.14□□□□□ -0.15
CBX5P45973 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CBX5P45973 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.14□□□□□ -0.15
CBX5P45973 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.14□□□□□ -0.15
CBX5P45973 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CBX5P45973 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 TOP3BP1-201ENST00000420768 1380 ntBASIC14.14□□□□□ -0.15
CBX5P45973 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 AC243591.1-201ENST00000452967 1364 ntBASIC14.14□□□□□ -0.15
CBX5P45973 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CBX5P45973 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.14□□□□□ -0.15
CBX5P45973 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.14□□□□□ -0.15
CBX5P45973 SPDYE21P-201ENST00000413323 827 ntBASIC14.14□□□□□ -0.15
CBX5P45973 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.14□□□□□ -0.15
CBX5P45973 LINC00982-205ENST00000420957 435 ntBASIC14.14□□□□□ -0.15
CBX5P45973 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.14□□□□□ -0.15
CBX5P45973 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.14□□□□□ -0.15
CBX5P45973 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.14□□□□□ -0.15
CBX5P45973 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 AC011498.5-201ENST00000592027 486 ntBASIC14.14□□□□□ -0.15
CBX5P45973 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CBX5P45973 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CBX5P45973 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.14□□□□□ -0.15
CBX5P45973 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.14□□□□□ -0.15
CBX5P45973 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.14□□□□□ -0.15
CBX5P45973 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.14□□□□□ -0.15
CBX5P45973 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CBX5P45973 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.14□□□□□ -0.15
CBX5P45973 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.14□□□□□ -0.15
CBX5P45973 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CBX5P45973 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CBX5P45973 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.13□□□□□ -0.15
CBX5P45973 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.13□□□□□ -0.15
CBX5P45973 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.13□□□□□ -0.15
CBX5P45973 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.13□□□□□ -0.15
CBX5P45973 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CBX5P45973 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CBX5P45973 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.13□□□□□ -0.15
CBX5P45973 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms