Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SHC1P29353 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SHC1P29353 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.01□□□□□ -0.01
SHC1P29353 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.01□□□□□ -0.01
SHC1P29353 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHC1P29353 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15□□□□□ -0.01
SHC1P29353 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SHC1P29353 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHC1P29353 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15□□□□□ -0.01
SHC1P29353 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15□□□□□ -0.01
SHC1P29353 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHC1P29353 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SHC1P29353 CD82-202ENST00000342935 967 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHC1P29353 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHC1P29353 RPSAP43-201ENST00000402237 625 ntBASIC15□□□□□ -0.01
SHC1P29353 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15□□□□□ -0.01
SHC1P29353 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHC1P29353 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15□□□□□ -0.01
SHC1P29353 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
SHC1P29353 C20orf181-201ENST00000623918 480 ntBASIC15□□□□□ -0.01
SHC1P29353 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SHC1P29353 AL031731.1-201ENST00000642131 2094 ntBASIC15□□□□□ -0.01
SHC1P29353 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15□□□□□ -0.01
SHC1P29353 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15□□□□□ -0.01
SHC1P29353 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SHC1P29353 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15□□□□□ -0.01
SHC1P29353 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SHC1P29353 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHC1P29353 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHC1P29353 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SHC1P29353 MST1L-201ENST00000442552 2185 ntBASIC15□□□□□ -0.01
SHC1P29353 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15□□□□□ -0.01
SHC1P29353 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.99□□□□□ -0.01
SHC1P29353 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.99□□□□□ -0.01
SHC1P29353 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.99□□□□□ -0.01
SHC1P29353 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.99□□□□□ -0.01
SHC1P29353 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.99□□□□□ -0.01
SHC1P29353 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SHC1P29353 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.99□□□□□ -0.01
SHC1P29353 UPF3AP3-201ENST00000420996 769 ntBASIC14.99□□□□□ -0.01
SHC1P29353 HTR5BP-201ENST00000430851 1154 ntBASIC14.99□□□□□ -0.01
SHC1P29353 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.99□□□□□ -0.01
SHC1P29353 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
SHC1P29353 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.99□□□□□ -0.01
SHC1P29353 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.99□□□□□ -0.01
SHC1P29353 GGT4P-201ENST00000623672 1708 ntBASIC14.99□□□□□ -0.01
SHC1P29353 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.99□□□□□ -0.01
SHC1P29353 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.99□□□□□ -0.01
SHC1P29353 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SHC1P29353 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SHC1P29353 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHC1P29353 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.99□□□□□ -0.01
SHC1P29353 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.98□□□□□ -0.01
SHC1P29353 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms