Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.16■□□□□ 0.34
RARAP10276 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RARAP10276 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.16■□□□□ 0.34
RARAP10276 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.16■□□□□ 0.34
RARAP10276 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RARAP10276 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.16■□□□□ 0.34
RARAP10276 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 AC092919.2-201ENST00000623631 1645 ntBASIC17.15■□□□□ 0.34
RARAP10276 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.15■□□□□ 0.34
RARAP10276 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.15■□□□□ 0.34
RARAP10276 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.15■□□□□ 0.34
RARAP10276 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.15■□□□□ 0.34
RARAP10276 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.15■□□□□ 0.34
RARAP10276 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 AC140113.2-201ENST00000604370 208 ntBASIC17.15■□□□□ 0.34
RARAP10276 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 AC069224.1-201ENST00000566372 1715 ntBASIC17.15■□□□□ 0.34
RARAP10276 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 DBET-201ENST00000630918 3363 ntBASIC17.15■□□□□ 0.34
RARAP10276 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RARAP10276 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.15■□□□□ 0.34
RARAP10276 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RARAP10276 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RARAP10276 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RARAP10276 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.14■□□□□ 0.33
RARAP10276 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.14■□□□□ 0.33
RARAP10276 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.14■□□□□ 0.33
RARAP10276 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.14■□□□□ 0.33
RARAP10276 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.14■□□□□ 0.33
RARAP10276 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.14■□□□□ 0.33
RARAP10276 AL513190.1-201ENST00000621254 727 ntBASIC17.14■□□□□ 0.33
RARAP10276 AC144831.1-201ENST00000573312 2656 ntBASIC17.14■□□□□ 0.33
RARAP10276 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RARAP10276 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RARAP10276 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.14■□□□□ 0.33
RARAP10276 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RARAP10276 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RARAP10276 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms