Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-CO1P00395 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
MT-CO1P00395 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-CO1P00395 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MT-CO1P00395 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
MT-CO1P00395 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MT-CO1P00395 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MT-CO1P00395 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.75■□□□□ 0.27
MT-CO1P00395 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
MT-CO1P00395 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.75■□□□□ 0.27
MT-CO1P00395 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MT-CO1P00395 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-CO1P00395 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-CO1P00395 CYMP-203ENST00000474680 1263 ntBASIC16.75■□□□□ 0.27
MT-CO1P00395 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MT-CO1P00395 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.75■□□□□ 0.27
MT-CO1P00395 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.75■□□□□ 0.27
MT-CO1P00395 AC020765.3-201ENST00000613051 740 ntBASIC16.75■□□□□ 0.27
MT-CO1P00395 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-CO1P00395 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MT-CO1P00395 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.75■□□□□ 0.27
MT-CO1P00395 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MT-CO1P00395 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MT-CO1P00395 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-CO1P00395 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-CO1P00395 GGT3P-204ENST00000453783 1664 ntBASIC16.75■□□□□ 0.27
MT-CO1P00395 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MT-CO1P00395 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MT-CO1P00395 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.74■□□□□ 0.27
MT-CO1P00395 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-CO1P00395 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 AC005052.1-201ENST00000625181 2492 ntBASIC16.74■□□□□ 0.27
MT-CO1P00395 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-CO1P00395 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-CO1P00395 AC008677.1-201ENST00000519230 1561 ntBASIC16.74■□□□□ 0.27
MT-CO1P00395 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.74■□□□□ 0.27
MT-CO1P00395 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-CO1P00395 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.74■□□□□ 0.27
MT-CO1P00395 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MT-CO1P00395 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.74■□□□□ 0.27
MT-CO1P00395 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MT-CO1P00395 AL512356.2-201ENST00000546955 174 ntBASIC16.74■□□□□ 0.27
MT-CO1P00395 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.74■□□□□ 0.27
MT-CO1P00395 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
MT-CO1P00395 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.74■□□□□ 0.27
MT-CO1P00395 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.74■□□□□ 0.27
MT-CO1P00395 AL355385.1-201ENST00000606123 409 ntBASIC16.74■□□□□ 0.27
MT-CO1P00395 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MT-CO1P00395 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-CO1P00395 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MT-CO1P00395 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-CO1P00395 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MT-CO1P00395 AL139384.1-201ENST00000612143 3047 ntBASIC16.73■□□□□ 0.27
MT-CO1P00395 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 AP3S2-216ENST00000617003 1561 ntBASIC16.73■□□□□ 0.27
MT-CO1P00395 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MT-CO1P00395 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-CO1P00395 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-CO1P00395 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms