Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.25□□□□□ -0.13
XRCC2O43543 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.25□□□□□ -0.13
XRCC2O43543 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 BX640515.1-201ENST00000617215 977 ntBASIC14.25□□□□□ -0.13
XRCC2O43543 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.25□□□□□ -0.13
XRCC2O43543 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.25□□□□□ -0.13
XRCC2O43543 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
XRCC2O43543 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.25□□□□□ -0.13
XRCC2O43543 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
XRCC2O43543 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.25□□□□□ -0.13
XRCC2O43543 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 AC103702.1-201ENST00000548801 2630 ntBASIC14.25□□□□□ -0.13
XRCC2O43543 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
XRCC2O43543 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.25□□□□□ -0.13
XRCC2O43543 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
XRCC2O43543 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
XRCC2O43543 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
XRCC2O43543 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
XRCC2O43543 AC025580.3-201ENST00000617932 1424 ntBASIC14.24□□□□□ -0.13
XRCC2O43543 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.24□□□□□ -0.13
XRCC2O43543 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 AC005622.1-201ENST00000636801 1703 ntBASIC14.24□□□□□ -0.13
XRCC2O43543 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
XRCC2O43543 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.24□□□□□ -0.13
XRCC2O43543 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
XRCC2O43543 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.24□□□□□ -0.13
XRCC2O43543 AC007967.2-201ENST00000432613 625 ntBASIC14.24□□□□□ -0.13
XRCC2O43543 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.24□□□□□ -0.13
XRCC2O43543 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.24□□□□□ -0.13
XRCC2O43543 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 RNA5SP416-201ENST00000516838 111 ntBASIC14.24□□□□□ -0.13
XRCC2O43543 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.24□□□□□ -0.13
XRCC2O43543 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.24□□□□□ -0.13
XRCC2O43543 KRT19P2-202ENST00000557173 1012 ntBASIC14.24□□□□□ -0.13
XRCC2O43543 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.24□□□□□ -0.13
XRCC2O43543 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.24□□□□□ -0.13
XRCC2O43543 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.24□□□□□ -0.13
XRCC2O43543 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
XRCC2O43543 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.24□□□□□ -0.13
XRCC2O43543 AL161645.1-201ENST00000622716 1255 ntBASIC14.24□□□□□ -0.13
XRCC2O43543 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.24□□□□□ -0.13
XRCC2O43543 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
XRCC2O43543 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XRCC2O43543 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.24□□□□□ -0.13
XRCC2O43543 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
XRCC2O43543 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
XRCC2O43543 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.23□□□□□ -0.13
XRCC2O43543 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
XRCC2O43543 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
XRCC2O43543 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.23□□□□□ -0.13
XRCC2O43543 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
XRCC2O43543 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
XRCC2O43543 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
XRCC2O43543 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
XRCC2O43543 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
XRCC2O43543 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.23□□□□□ -0.13
XRCC2O43543 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
XRCC2O43543 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.23□□□□□ -0.13
XRCC2O43543 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.23□□□□□ -0.13
XRCC2O43543 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms