Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
IFRD1O00458 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IFRD1O00458 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.16■□□□□ 0.18
IFRD1O00458 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
IFRD1O00458 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
IFRD1O00458 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.16■□□□□ 0.18
IFRD1O00458 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.16■□□□□ 0.18
IFRD1O00458 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.16■□□□□ 0.18
IFRD1O00458 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
IFRD1O00458 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.16■□□□□ 0.18
IFRD1O00458 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.16■□□□□ 0.18
IFRD1O00458 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.16■□□□□ 0.18
IFRD1O00458 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.16■□□□□ 0.18
IFRD1O00458 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.16■□□□□ 0.18
IFRD1O00458 AC004835.2-201ENST00000603762 682 ntBASIC16.16■□□□□ 0.18
IFRD1O00458 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.16■□□□□ 0.18
IFRD1O00458 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.16■□□□□ 0.18
IFRD1O00458 AC105339.1-204ENST00000636249 355 ntBASIC16.16■□□□□ 0.18
IFRD1O00458 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.16■□□□□ 0.18
IFRD1O00458 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
IFRD1O00458 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.16■□□□□ 0.18
IFRD1O00458 GGT4P-201ENST00000623672 1708 ntBASIC16.16■□□□□ 0.18
IFRD1O00458 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
IFRD1O00458 PCGF3-213ENST00000620529 1899 ntBASIC16.16■□□□□ 0.18
IFRD1O00458 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFRD1O00458 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
IFRD1O00458 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.16■□□□□ 0.18
IFRD1O00458 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.15■□□□□ 0.18
IFRD1O00458 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
IFRD1O00458 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.15■□□□□ 0.18
IFRD1O00458 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFRD1O00458 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.15■□□□□ 0.18
IFRD1O00458 AC079140.1-201ENST00000508039 487 ntBASIC16.15■□□□□ 0.18
IFRD1O00458 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.15■□□□□ 0.18
IFRD1O00458 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.15■□□□□ 0.18
IFRD1O00458 KRT8P48-201ENST00000515599 1220 ntBASIC16.15■□□□□ 0.18
IFRD1O00458 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.15■□□□□ 0.18
IFRD1O00458 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.15■□□□□ 0.18
IFRD1O00458 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IFRD1O00458 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
IFRD1O00458 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.15■□□□□ 0.18
IFRD1O00458 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.15■□□□□ 0.18
IFRD1O00458 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 AL596442.2-201ENST00000610240 980 ntBASIC16.15■□□□□ 0.18
IFRD1O00458 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.15■□□□□ 0.18
IFRD1O00458 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
IFRD1O00458 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.15■□□□□ 0.18
IFRD1O00458 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.15■□□□□ 0.18
IFRD1O00458 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
IFRD1O00458 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IFRD1O00458 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.15■□□□□ 0.18
IFRD1O00458 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
IFRD1O00458 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFRD1O00458 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
IFRD1O00458 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
IFRD1O00458 GGT3P-204ENST00000453783 1664 ntBASIC16.14■□□□□ 0.18
IFRD1O00458 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFRD1O00458 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFRD1O00458 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFRD1O00458 AL139384.1-201ENST00000612143 3047 ntBASIC16.14■□□□□ 0.17
IFRD1O00458 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms