Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 AC099343.3-201ENST00000605834 2503 ntBASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 AC131902.2-201ENST00000566892 2172 ntBASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 LINC02012-201ENST00000608206 1725 ntBASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 FAM95B1-212ENST00000592873 4692 ntBASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 PPT1-215ENST00000641471 2368 ntBASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 AC005912.2-201ENST00000619492 2400 ntBASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 GPR26-201ENST00000284674 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
CHKB-CPT1BH3BT56 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CHKB-CPT1BH3BT56 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 LINC02228-203ENST00000641970 1355 ntBASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 AC006504.5-208ENST00000588784 2401 ntBASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms