Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC24.16■■□□□ 1.46
CDC42BPBQ9Y5S2 HAUS4P1-201ENST00000406739 1145 ntBASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 NME6-203ENST00000415644 849 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 PHKG1P2-201ENST00000457537 863 ntBASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 AP001094.4-201ENST00000579008 2176 ntBASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 AC026410.3-201ENST00000514280 936 ntBASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 AC005695.3-201ENST00000614522 232 ntBASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPBQ9Y5S2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CDC42BPBQ9Y5S2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CDC42BPBQ9Y5S2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CDC42BPBQ9Y5S2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CDC42BPBQ9Y5S2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CDC42BPBQ9Y5S2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CDC42BPBQ9Y5S2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
CDC42BPBQ9Y5S2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 PFN1P12-201ENST00000455938 534 ntBASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 AP001063.1-201ENST00000568332 529 ntBASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 MIR3615-201ENST00000581999 87 ntBASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 AL450472.2-201ENST00000603663 1156 ntBASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 DRD5P1-201ENST00000456605 1438 ntBASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPBQ9Y5S2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 AL607033.1-201ENST00000623900 1599 ntBASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPBQ9Y5S2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms