Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 RNU1-129P-201ENST00000384064 167 ntBASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 BASP1P1-201ENST00000430708 665 ntBASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 U1.21-201ENST00000580816 167 ntBASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA6Q9Y5G7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 AC107890.1-201ENST00000422478 521 ntBASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 AC093214.1-201ENST00000511688 1107 ntBASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 AC087641.1-201ENST00000557561 1021 ntBASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 AC140878.1-201ENST00000565277 250 ntBASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 AL031055.1-201ENST00000606362 631 ntBASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 AC008267.7-201ENST00000624570 1194 ntBASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 AP001350.2-201ENST00000625104 1094 ntBASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA6Q9Y5G7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA6Q9Y5G7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms