Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 REXO1L8P-201ENST00000604378 1897 ntBASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 MIR648-201ENST00000385046 94 ntBASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 AC005363.2-201ENST00000618631 242 ntBASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP3Q9Y2W7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP3Q9Y2W7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms