Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FOXJ3Q9UPW0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
FOXJ3Q9UPW0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXJ3Q9UPW0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
FOXJ3Q9UPW0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXJ3Q9UPW0 PRAL-201ENST00000624952 3286 ntBASIC14.33□□□□□ -0.11
FOXJ3Q9UPW0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXJ3Q9UPW0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXJ3Q9UPW0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXJ3Q9UPW0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXJ3Q9UPW0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXJ3Q9UPW0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXJ3Q9UPW0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXJ3Q9UPW0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FOXJ3Q9UPW0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 PTCHD3P3-201ENST00000403073 906 ntBASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 HCG4-201ENST00000418983 998 ntBASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXJ3Q9UPW0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 AC063926.3-201ENST00000624734 5658 ntBASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 AP000347.1-202ENST00000435868 847 ntBASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 SLC25A6P2-201ENST00000497974 877 ntBASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 AC005412.3-201ENST00000580309 715 ntBASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXJ3Q9UPW0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms