Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 AL603832.2-201ENST00000566195 2125 ntBASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 AL355877.3-201ENST00000622820 899 ntBASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 HCG4P8-203ENST00000443049 980 ntBASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 KRT18P31-201ENST00000506277 1292 ntBASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 AC091304.2-201ENST00000564639 760 ntBASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 AF228730.7-201ENST00000641842 219 ntBASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB4Q9UN71 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 PRELID1P1-202ENST00000567272 903 ntBASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 MTDHP4-201ENST00000600287 670 ntBASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 AC008608.2-201ENST00000606089 416 ntBASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB4Q9UN71 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms