Protein–RNA interactions for Protein: Q9UBR1

UPB1, Beta-ureidopropionase, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPB1Q9UBR1 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
UPB1Q9UBR1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPB1Q9UBR1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.81□□□□□ -0.04
UPB1Q9UBR1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
UPB1Q9UBR1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.81□□□□□ -0.04
UPB1Q9UBR1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPB1Q9UBR1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPB1Q9UBR1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPB1Q9UBR1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.81□□□□□ -0.04
UPB1Q9UBR1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 MIR4492-201ENST00000581627 80 ntBASIC14.8□□□□□ -0.04
UPB1Q9UBR1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.8□□□□□ -0.04
UPB1Q9UBR1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPB1Q9UBR1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 AL645728.1-201ENST00000366221 2101 ntBASIC14.79□□□□□ -0.04
UPB1Q9UBR1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 AC002056.1-201ENST00000395613 760 ntBASIC14.79□□□□□ -0.04
UPB1Q9UBR1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.79□□□□□ -0.04
UPB1Q9UBR1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 AC010327.4-202ENST00000591484 748 ntBASIC14.79□□□□□ -0.04
UPB1Q9UBR1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 AL031055.1-201ENST00000606362 631 ntBASIC14.79□□□□□ -0.04
UPB1Q9UBR1 AC007950.2-201ENST00000615045 2347 ntBASIC14.79□□□□□ -0.04
UPB1Q9UBR1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPB1Q9UBR1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPB1Q9UBR1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPB1Q9UBR1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPB1Q9UBR1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPB1Q9UBR1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms