Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 HIST3H2BA-201ENST00000436555 524 ntBASIC19.53■□□□□ 0.72
SALL1Q9NSC2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 SDHAP3-202ENST00000515467 728 ntBASIC19.53■□□□□ 0.72
SALL1Q9NSC2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 MIR6069-201ENST00000620069 79 ntBASIC19.53■□□□□ 0.72
SALL1Q9NSC2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SALL1Q9NSC2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 FO393414.2-201ENST00000405153 598 ntBASIC19.52■□□□□ 0.72
SALL1Q9NSC2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 AL353779.1-201ENST00000434793 351 ntBASIC19.52■□□□□ 0.72
SALL1Q9NSC2 EEF1DP4-201ENST00000446006 880 ntBASIC19.52■□□□□ 0.72
SALL1Q9NSC2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 SPDYE18-201ENST00000510091 1050 ntBASIC19.52■□□□□ 0.72
SALL1Q9NSC2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 AL596325.1-201ENST00000563991 1082 ntBASIC19.52■□□□□ 0.72
SALL1Q9NSC2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 TP53TG3HP-202ENST00000569755 579 ntBASIC19.52■□□□□ 0.72
SALL1Q9NSC2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.52■□□□□ 0.72
SALL1Q9NSC2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 CYP2T1P-202ENST00000641596 2535 ntBASIC19.52■□□□□ 0.72
SALL1Q9NSC2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SALL1Q9NSC2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SALL1Q9NSC2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SALL1Q9NSC2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SALL1Q9NSC2 AL662844.4-201ENST00000606367 2838 ntBASIC19.52■□□□□ 0.71
SALL1Q9NSC2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.52■□□□□ 0.71
SALL1Q9NSC2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SALL1Q9NSC2 AC005052.1-201ENST00000625181 2492 ntBASIC19.52■□□□□ 0.71
SALL1Q9NSC2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.52■□□□□ 0.71
SALL1Q9NSC2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 DFFBP1-201ENST00000433250 979 ntBASIC19.51■□□□□ 0.71
SALL1Q9NSC2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 CR383656.12-201ENST00000549567 513 ntBASIC19.51■□□□□ 0.71
SALL1Q9NSC2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.51■□□□□ 0.71
SALL1Q9NSC2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 DOC2GP-204ENST00000639052 2548 ntBASIC19.51■□□□□ 0.71
SALL1Q9NSC2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms