Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC38A3Q99624 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC38A3Q99624 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC38A3Q99624 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC38A3Q99624 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC38A3Q99624 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC38A3Q99624 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC38A3Q99624 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC38A3Q99624 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC38A3Q99624 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC38A3Q99624 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC38A3Q99624 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC38A3Q99624 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 LINC02560-201ENST00000596379 459 ntBASIC15.82■□□□□ 0.12
SLC38A3Q99624 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC38A3Q99624 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A3Q99624 AL391005.1-201ENST00000623953 2435 ntBASIC15.82■□□□□ 0.12
SLC38A3Q99624 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 AC190387.1-201ENST00000551683 408 ntBASIC15.81■□□□□ 0.12
SLC38A3Q99624 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 AC008761.3-201ENST00000624803 892 ntBASIC15.81■□□□□ 0.12
SLC38A3Q99624 LINC01144-201ENST00000626198 1710 ntBASIC15.81■□□□□ 0.12
SLC38A3Q99624 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC38A3Q99624 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A3Q99624 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC38A3Q99624 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A3Q99624 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC38A3Q99624 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC38A3Q99624 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A3Q99624 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC38A3Q99624 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms