Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.9■□□□□ 0.3
IFT43Q96FT9 AP000344.2-201ENST00000512987 629 ntBASIC16.9■□□□□ 0.3
IFT43Q96FT9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 AL355385.1-201ENST00000606123 409 ntBASIC16.9■□□□□ 0.3
IFT43Q96FT9 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.9■□□□□ 0.3
IFT43Q96FT9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFT43Q96FT9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
IFT43Q96FT9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.89■□□□□ 0.3
IFT43Q96FT9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.89■□□□□ 0.3
IFT43Q96FT9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
IFT43Q96FT9 SNX33P1-201ENST00000592116 1762 ntBASIC16.89■□□□□ 0.3
IFT43Q96FT9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
IFT43Q96FT9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
IFT43Q96FT9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
IFT43Q96FT9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 AC024909.3-201ENST00000611513 2257 ntBASIC16.89■□□□□ 0.29
IFT43Q96FT9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFT43Q96FT9 AC006449.5-201ENST00000610658 2098 ntBASIC16.89■□□□□ 0.29
IFT43Q96FT9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
IFT43Q96FT9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.88■□□□□ 0.29
IFT43Q96FT9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
IFT43Q96FT9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.88■□□□□ 0.29
IFT43Q96FT9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.88■□□□□ 0.29
IFT43Q96FT9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IFT43Q96FT9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms