Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
USP6NLQ92738 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6NLQ92738 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
USP6NLQ92738 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6NLQ92738 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USP6NLQ92738 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.36■□□□□ 0.53
USP6NLQ92738 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USP6NLQ92738 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.36■□□□□ 0.53
USP6NLQ92738 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.36■□□□□ 0.53
USP6NLQ92738 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.36■□□□□ 0.53
USP6NLQ92738 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.36■□□□□ 0.53
USP6NLQ92738 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USP6NLQ92738 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.36■□□□□ 0.53
USP6NLQ92738 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.36■□□□□ 0.53
USP6NLQ92738 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.36■□□□□ 0.53
USP6NLQ92738 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.36■□□□□ 0.53
USP6NLQ92738 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.36■□□□□ 0.53
USP6NLQ92738 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.36■□□□□ 0.53
USP6NLQ92738 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.36■□□□□ 0.53
USP6NLQ92738 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 MIR4538-201ENST00000581377 78 ntBASIC18.36■□□□□ 0.53
USP6NLQ92738 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
USP6NLQ92738 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.36■□□□□ 0.53
USP6NLQ92738 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.36■□□□□ 0.53
USP6NLQ92738 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6NLQ92738 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
USP6NLQ92738 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USP6NLQ92738 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USP6NLQ92738 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6NLQ92738 Z97205.2-201ENST00000564697 1639 ntBASIC18.35■□□□□ 0.53
USP6NLQ92738 CYP4F24P-201ENST00000586049 1580 ntBASIC18.35■□□□□ 0.53
USP6NLQ92738 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.35■□□□□ 0.53
USP6NLQ92738 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
USP6NLQ92738 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.35■□□□□ 0.53
USP6NLQ92738 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.35■□□□□ 0.53
USP6NLQ92738 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.35■□□□□ 0.53
USP6NLQ92738 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USP6NLQ92738 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.35■□□□□ 0.53
USP6NLQ92738 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.35■□□□□ 0.53
USP6NLQ92738 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.35■□□□□ 0.53
USP6NLQ92738 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.35■□□□□ 0.53
USP6NLQ92738 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6NLQ92738 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6NLQ92738 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USP6NLQ92738 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6NLQ92738 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.34■□□□□ 0.53
USP6NLQ92738 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP6NLQ92738 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6NLQ92738 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.34■□□□□ 0.53
USP6NLQ92738 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USP6NLQ92738 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6NLQ92738 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.34■□□□□ 0.53
USP6NLQ92738 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.34■□□□□ 0.53
USP6NLQ92738 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP6NLQ92738 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USP6NLQ92738 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP6NLQ92738 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
USP6NLQ92738 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP6NLQ92738 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6NLQ92738 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6NLQ92738 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6NLQ92738 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
USP6NLQ92738 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6NLQ92738 ACTBP11-201ENST00000436287 1126 ntBASIC18.34■□□□□ 0.53
USP6NLQ92738 AC245100.3-201ENST00000441281 285 ntBASIC18.34■□□□□ 0.53
USP6NLQ92738 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.34■□□□□ 0.53
USP6NLQ92738 RN7SL399P-201ENST00000471648 279 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms