Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 BNIP3P18-201ENST00000593976 575 ntBASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.27■□□□□ 0.2
CKAP2Q8WWK9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 NCF1C-201ENST00000438382 1427 ntBASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CKAP2Q8WWK9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 AC090616.6-203ENST00000579186 1945 ntBASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.26■□□□□ 0.19
CKAP2Q8WWK9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms