Protein–RNA interactions for Protein: Q8WW12

PCNP, PEST proteolytic signal-containing nuclear protein, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPQ8WW12 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCNPQ8WW12 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.58□□□□□ -0.24
PCNPQ8WW12 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.57□□□□□ -0.24
PCNPQ8WW12 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 TSPY20P-201ENST00000450910 630 ntBASIC13.57□□□□□ -0.24
PCNPQ8WW12 HLA-J-202ENST00000469281 1241 ntBASIC13.57□□□□□ -0.24
PCNPQ8WW12 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 AP002982.1-201ENST00000492365 877 ntBASIC13.57□□□□□ -0.24
PCNPQ8WW12 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 ITM2C-210ENST00000620962 501 ntBASIC13.57□□□□□ -0.24
PCNPQ8WW12 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCNPQ8WW12 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.57□□□□□ -0.24
PCNPQ8WW12 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.56□□□□□ -0.24
PCNPQ8WW12 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PCNPQ8WW12 AL928921.2-201ENST00000641325 2442 ntBASIC13.56□□□□□ -0.24
PCNPQ8WW12 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.56□□□□□ -0.24
PCNPQ8WW12 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCNPQ8WW12 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCNPQ8WW12 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCNPQ8WW12 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCNPQ8WW12 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.56□□□□□ -0.24
PCNPQ8WW12 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PCNPQ8WW12 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.56□□□□□ -0.24
PCNPQ8WW12 AC069224.1-201ENST00000566372 1715 ntBASIC13.56□□□□□ -0.24
PCNPQ8WW12 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCNPQ8WW12 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCNPQ8WW12 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCNPQ8WW12 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.56□□□□□ -0.24
PCNPQ8WW12 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCNPQ8WW12 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.56□□□□□ -0.24
PCNPQ8WW12 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCNPQ8WW12 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCNPQ8WW12 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms