Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 LINC01225-203ENST00000563550 1244 ntBASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 AL138918.1-201ENST00000568306 659 ntBASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 AL691403.2-201ENST00000618460 490 ntBASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC12Q8WUD4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 MIR346-201ENST00000362234 95 ntBASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 CNN2P11-201ENST00000429351 262 ntBASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 AC005237.2-201ENST00000434368 219 ntBASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 AP000842.3-202ENST00000569238 1080 ntBASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 AC084121.4-201ENST00000641598 221 ntBASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 AF228730.8-201ENST00000642140 221 ntBASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 UXT-AS1-201ENST00000590504 1525 ntBASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC12Q8WUD4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 AC069335.1-201ENST00000489972 472 ntBASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 AC098859.1-201ENST00000502915 1238 ntBASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 AC139530.3-201ENST00000620344 690 ntBASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC12Q8WUD4 AL391005.1-201ENST00000623953 2435 ntBASIC18.86■□□□□ 0.61
CCDC12Q8WUD4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC12Q8WUD4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms