Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 INTS4P1-201ENST00000438455 1935 ntBASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CNIH3Q8TBE1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 RNF152P1-201ENST00000397754 604 ntBASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 TCAF2P1-201ENST00000291129 2421 ntBASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.98□□□□□ -0.01
CNIH3Q8TBE1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 AP000867.4-201ENST00000641616 219 ntBASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNIH3Q8TBE1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms