Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 DOC2GP-202ENST00000514950 1163 ntBASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 AC007541.1-201ENST00000570282 1469 ntBASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 AC006538.1-201ENST00000567905 1585 ntBASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 ELK1P1-201ENST00000485699 580 ntBASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 MIR4321-201ENST00000592276 80 ntBASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 AC026979.3-201ENST00000607315 403 ntBASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 PCDHB19P-201ENST00000570871 2371 ntBASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 AC092364.2-201ENST00000596710 2692 ntBASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RAI1Q7Z5J4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms