Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 PC-214ENST00000628663 1470 ntTSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC10.92□□□□□ -0.66
SCXQ7RTU7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 MKNK2P1-201ENST00000437526 628 ntBASIC10.91□□□□□ -0.66
SCXQ7RTU7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 CEND1P1-201ENST00000451006 455 ntBASIC10.91□□□□□ -0.66
SCXQ7RTU7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 AL355385.1-201ENST00000606123 409 ntBASIC10.91□□□□□ -0.66
SCXQ7RTU7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 ELL2P1-201ENST00000413990 1906 ntBASIC10.91□□□□□ -0.66
SCXQ7RTU7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCXQ7RTU7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 AC005052.1-201ENST00000625181 2492 ntBASIC10.91□□□□□ -0.66
SCXQ7RTU7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
SCXQ7RTU7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 KRT18P28-201ENST00000453838 1332 ntBASIC10.9□□□□□ -0.66
SCXQ7RTU7 AL590787.1-201ENST00000568856 1315 ntBASIC10.9□□□□□ -0.66
SCXQ7RTU7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 REXO1L11P-201ENST00000620964 1927 ntBASIC10.9□□□□□ -0.66
SCXQ7RTU7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 OR2I1P-210ENST00000642037 4691 ntBASIC10.9□□□□□ -0.66
SCXQ7RTU7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms