Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 AL139099.5-201ENST00000635274 300 ntBASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 AL033527.5-202ENST00000641632 1098 ntBASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 AL512652.2-201ENST00000625156 1716 ntBASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 AC108725.1-201ENST00000495472 409 ntBASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 AC010319.3-201ENST00000597028 470 ntBASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 MIR8072-201ENST00000614241 80 ntBASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 PDIA3P1-201ENST00000471856 1510 ntBASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 AC018665.1-201ENST00000622927 1362 ntBASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
OTOP1Q7RTM1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 AC099336.1-201ENST00000417053 1171 ntBASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.77■□□□□ 0.6
OTOP1Q7RTM1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.77■□□□□ 0.59
OTOP1Q7RTM1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.77■□□□□ 0.59
OTOP1Q7RTM1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
OTOP1Q7RTM1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms