Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 MTHFR-217ENST00000641820 1569 ntBASIC11.1□□□□□ -0.63
LINC01556Q5JQF7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
LINC01556Q5JQF7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01556Q5JQF7 REXO1L8P-201ENST00000604378 1897 ntBASIC11.1□□□□□ -0.63
LINC01556Q5JQF7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01556Q5JQF7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
LINC01556Q5JQF7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01556Q5JQF7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01556Q5JQF7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 AC005052.1-201ENST00000625181 2492 ntBASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 AC006449.6-201ENST00000612330 2296 ntBASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 SPDYE7P-202ENST00000420373 878 ntBASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 RNA5SP410-201ENST00000516285 106 ntBASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 ALG1L8P-201ENST00000533887 760 ntBASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 AC093520.2-201ENST00000561830 333 ntBASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 AL118508.1-201ENST00000613502 2345 ntBASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 FOXO1B-201ENST00000504678 1527 ntBASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01556Q5JQF7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
LINC01556Q5JQF7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
LINC01556Q5JQF7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.63
LINC01556Q5JQF7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01556Q5JQF7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms