Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CLK3P2-201ENST00000427566 1453 ntBASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM71Q2Q1W2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 AL645608.8-201ENST00000606034 2086 ntBASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 ANKRD19P-201ENST00000338192 862 ntBASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 RPL13P2-201ENST00000440687 659 ntBASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 CROCCP4-201ENST00000457096 498 ntBASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 MIR6775-201ENST00000617557 69 ntBASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 AC005915.1-201ENST00000624912 2018 ntBASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM71Q2Q1W2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM71Q2Q1W2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TRIM71Q2Q1W2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM71Q2Q1W2 AL691432.1-201ENST00000596308 1422 ntBASIC17.64■□□□□ 0.42
TRIM71Q2Q1W2 AC105020.1-201ENST00000435356 2205 ntBASIC17.64■□□□□ 0.42
TRIM71Q2Q1W2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM71Q2Q1W2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms