Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.4□□□□□ -0.1
SEC61A1P61619 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.4□□□□□ -0.1
SEC61A1P61619 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.4□□□□□ -0.1
SEC61A1P61619 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.4□□□□□ -0.1
SEC61A1P61619 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.4□□□□□ -0.1
SEC61A1P61619 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.4□□□□□ -0.1
SEC61A1P61619 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
SEC61A1P61619 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.4□□□□□ -0.1
SEC61A1P61619 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 TERC-201ENST00000602385 541 ntBASIC14.4□□□□□ -0.1
SEC61A1P61619 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.4□□□□□ -0.1
SEC61A1P61619 AC023511.2-201ENST00000618803 211 ntBASIC14.4□□□□□ -0.1
SEC61A1P61619 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.4□□□□□ -0.1
SEC61A1P61619 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC61A1P61619 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.39□□□□□ -0.11
SEC61A1P61619 AL135999.2-201ENST00000622438 1686 ntBASIC14.39□□□□□ -0.11
SEC61A1P61619 AC006058.4-201ENST00000624016 1670 ntBASIC14.39□□□□□ -0.11
SEC61A1P61619 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SEC61A1P61619 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 MTHFR-217ENST00000641820 1569 ntBASIC14.39□□□□□ -0.11
SEC61A1P61619 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SEC61A1P61619 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.39□□□□□ -0.11
SEC61A1P61619 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.39□□□□□ -0.11
SEC61A1P61619 MED15P5-201ENST00000423150 992 ntBASIC14.39□□□□□ -0.11
SEC61A1P61619 AC108751.1-201ENST00000490852 363 ntBASIC14.39□□□□□ -0.11
SEC61A1P61619 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.39□□□□□ -0.11
SEC61A1P61619 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.39□□□□□ -0.11
SEC61A1P61619 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.39□□□□□ -0.11
SEC61A1P61619 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.39□□□□□ -0.11
SEC61A1P61619 AC067930.6-201ENST00000623257 4947 ntBASIC14.39□□□□□ -0.11
SEC61A1P61619 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC61A1P61619 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC61A1P61619 EGFEM1P-202ENST00000431685 1563 ntBASIC14.39□□□□□ -0.11
SEC61A1P61619 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61A1P61619 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61A1P61619 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61A1P61619 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61A1P61619 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61A1P61619 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SEC61A1P61619 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.38□□□□□ -0.11
SEC61A1P61619 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61A1P61619 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61A1P61619 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SEC61A1P61619 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61A1P61619 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC61A1P61619 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.38□□□□□ -0.11
SEC61A1P61619 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.38□□□□□ -0.11
SEC61A1P61619 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms