Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
UBE2NP61088 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2NP61088 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
UBE2NP61088 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2NP61088 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UBE2NP61088 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
UBE2NP61088 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2NP61088 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
UBE2NP61088 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
UBE2NP61088 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.4□□□□□ -0.1
UBE2NP61088 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2NP61088 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.4□□□□□ -0.1
UBE2NP61088 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.4□□□□□ -0.1
UBE2NP61088 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2NP61088 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
UBE2NP61088 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.4□□□□□ -0.1
UBE2NP61088 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
UBE2NP61088 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.4□□□□□ -0.1
UBE2NP61088 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.4□□□□□ -0.1
UBE2NP61088 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.4□□□□□ -0.1
UBE2NP61088 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 FLJ38576-201ENST00000623820 2459 ntBASIC14.4□□□□□ -0.1
UBE2NP61088 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2NP61088 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 MST1L-201ENST00000442552 2185 ntBASIC14.4□□□□□ -0.1
UBE2NP61088 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.4□□□□□ -0.1
UBE2NP61088 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2NP61088 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2NP61088 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBE2NP61088 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2NP61088 AC073439.1-201ENST00000624121 1774 ntBASIC14.39□□□□□ -0.11
UBE2NP61088 AC011676.5-201ENST00000624864 2660 ntBASIC14.39□□□□□ -0.11
UBE2NP61088 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2NP61088 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
UBE2NP61088 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2NP61088 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.39□□□□□ -0.11
UBE2NP61088 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2NP61088 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
UBE2NP61088 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2NP61088 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
UBE2NP61088 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.39□□□□□ -0.11
UBE2NP61088 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.39□□□□□ -0.11
UBE2NP61088 AC069335.1-201ENST00000489972 472 ntBASIC14.39□□□□□ -0.11
UBE2NP61088 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.39□□□□□ -0.11
UBE2NP61088 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2NP61088 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2NP61088 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2NP61088 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.39□□□□□ -0.11
UBE2NP61088 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2NP61088 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UBE2NP61088 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UBE2NP61088 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
UBE2NP61088 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBE2NP61088 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
UBE2NP61088 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2NP61088 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2NP61088 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2NP61088 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2NP61088 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
UBE2NP61088 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms