Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 U1.21-201ENST00000580816 167 ntBASIC15.27■□□□□ 0.04
RNF144AP50876 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF144AP50876 AC023141.13-201ENST00000604991 943 ntBASIC15.27■□□□□ 0.04
RNF144AP50876 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF144AP50876 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RNF144AP50876 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF144AP50876 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF144AP50876 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF144AP50876 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF144AP50876 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF144AP50876 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF144AP50876 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF144AP50876 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF144AP50876 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF144AP50876 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.27■□□□□ 0.03
RNF144AP50876 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF144AP50876 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF144AP50876 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF144AP50876 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF144AP50876 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF144AP50876 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF144AP50876 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF144AP50876 RHOQP3-201ENST00000437982 621 ntBASIC15.26■□□□□ 0.03
RNF144AP50876 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF144AP50876 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF144AP50876 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF144AP50876 AL031432.2-201ENST00000566714 459 ntBASIC15.26■□□□□ 0.03
RNF144AP50876 AL928711.1-201ENST00000570165 459 ntBASIC15.26■□□□□ 0.03
RNF144AP50876 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RNF144AP50876 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF144AP50876 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF144AP50876 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF144AP50876 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF144AP50876 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF144AP50876 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF144AP50876 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.25■□□□□ 0.03
RNF144AP50876 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF144AP50876 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RNF144AP50876 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 KRT18P3-201ENST00000451602 1288 ntBASIC15.25■□□□□ 0.03
RNF144AP50876 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
RNF144AP50876 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF144AP50876 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.25■□□□□ 0.03
RNF144AP50876 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF144AP50876 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF144AP50876 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
RNF144AP50876 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF144AP50876 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF144AP50876 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF144AP50876 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RNF144AP50876 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms